Links

Simon Gravel - Software

Moments: allele frequency simulation and demographic inference

Software can be found on bitbucket. The article is on Genetics or biorxiv

Jack: predicting discovery rates

See my github repository for softwares jack.py and lp.py, to perform jackknife and linear programming estimates of discovery rates according to Predicting discovery rates of genomic features

lp.py is a python executable to perform linear programming extrapolations according to Predicting discovery rates of genomic features

Tracts: Inferring admixture histories

Tracts is an implementation of the tract length analysis methods from Population genetics models of local ancestry